MPNTR RS Research topic
Projects of the Science Fund RS
Tools and Data
Professor Milivoj Dopsaj and Dr Edelmiro Moman visited our Lab
Tamara at the GCC2019 in Freiburg
Tamara, Branka i Rajko at the Ensembl workshops
Nevena teaches Genomics at the Faculty of Biology
Tools and Data
MethSpec: a simple and efficient tool for evaluation of MSP primer specificity
MethSpec is a simple tool that carries out evaluation of MSP primer specificity based on primer pair's sequences and parameters such as: primer concentration, ion concentration and annealing temperature.
TRI_tool - Transcriptional Regulation Interactions
Transcriptional Regulation Interactions tool TRI_tool is an open-accessed web service for finding transcriptional regulation interactors.
IDPpi_tool - Human Intrinsically Disordered Protein Interactions
IDPpi_tool is an open-access web service for finding proteins, interactors of human intrinsically disordered protein.
HP-GAS - Prediction of Human Protein protein interactions based on Genetic Algorithm driven Stacking method
HP-GAS is a software for prediction of human protein protein interactions based on graph, evolutionary and sequence features. It uses the ensemble of models generated by machine learning (ML) algorithms, where automatic ensembling of ML algorithms is driven by genetic algorithm.
DiNGO: standalone application for Gene Ontology and Human Phenotype Ontology term enrichment analysis
DiNGO is a standalone application based on open source code from BiNGO a Java based tool aimed to determine which Gene Ontology (GO) categories are overrepresented in a set of genes.
EpiMut: Alignment-independent tool for functional annotation of amino acid substitutions in epigenetic factors
EpiMut is software for functional annotation of AASs in epigenetic factors that is independent from sequence alignments and homology search. It is based on the biochemical and physicochemical characteristics of amino acids and digital signal processing approach in protein sequence analysis.
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