Tools and Data
Bioinformatics training: Analysis of genomic data with Galaxy platform
Rajko’s invited talk at the Hbioinfo2018
Branka at the GREEKC meeting in EMBL-EBI
Milica Aleksić defended her graduation thesis
Milan in Estonia
Tools and Data
ISTREE - Informational Spectrum based Phylogenetic Analysis
ISTREE is new approach in phylogenetic analysis that is based on Informational spectrum method (ISM). It allows the assessment of functional viral evolution and it is effective online tool for functional phylogenetic analysis.
Prediction of efficacy of A/H5N1
The tool that predicts the efficacy of interaction between A/H5N1 influenza virus and the human receptor.
Prediction of efficacy of A/H1N1
The tool that predicts the efficacy of interaction between A/H1N1 influenza virus and the human receptor.
Classification of missense mutations in TET2 sequence
TET2 gene is frequently mutated in myeloid neoplasms. This is the ISM based tool for discrimination between neutral polymorphisms and mutations.
Calculation of the Molecular Descriptors AQVN and EIIP.
MethSpec: a simple and efficient tool for evaluation of MSP primer specificity
MethSpec is a simple tool that carries out evaluation of MSP primer specificity based on primer pair's sequences and parameters such as: primer concentration, ion concentration and annealing temperature.
TRI_tool - Transcriptional Regulation Interactions
Transcriptional Regulation Interactions tool TRI_tool is an open-accessed web service for finding transcriptional regulation interactors.
EpiMutNC - Prediction of epigenetic mutations effects in non-conserved regions
Epigenetic Mutations in Non-Conserved regions (EpiMutNC) is an open-accessed web tool for prediction of functional effects of amino acid substitutions in non-conserved regions of genes involved in epigenetic regulation.
Influenza A virus Monitor
Bioinformatics tool, based on ISTREE algorithm, for monitoring the evolution of swine influenza viruses towards a pandemic virus.
IDPpi_tool - Human Intrinsically Disordered Protein Interactions
IDPpi_tool is an open-access web service for finding proteins, interactors of human intrinsically disordered protein.
HP-GAS - Prediction of Human Protein protein interactions based on Genetic Algorithm driven Stacking method
HP-GAS is a software for prediction of human protein protein interactions based on graph, evolutionary and sequence features. It uses the ensemble of models generated by machine learning (ML) algorithms, where automatic ensembling of ML algorithms is driven by genetic algorithm.
© 2014 VINCA-180